Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
Ccdc38Q8CDN8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.44■□□□□ 0.22
Ccdc38Q8CDN8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Gm27300-201ENSMUST00000184085 97 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Gm27335-201ENSMUST00000184758 97 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Gm27628-201ENSMUST00000184911 107 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Gm15590-201ENSMUST00000078419 552 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc38Q8CDN8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Mir5126-201ENSMUST00000175513 77 ntBASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc38Q8CDN8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms