Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Vcpip1Q8CDG3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Vcpip1Q8CDG3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vcpip1Q8CDG3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Gm15173-201ENSMUST00000122049 433 ntBASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Gm10060-201ENSMUST00000212002 111 ntBASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Gm5364-201ENSMUST00000216789 889 ntBASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 AV026068-213ENSMUST00000223675 1171 ntBASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vcpip1Q8CDG3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Vcpip1Q8CDG3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms