Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Mir449b-201ENSMUST00000104833 80 ntBASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Gm38225-201ENSMUST00000194001 393 ntBASIC17.11■□□□□ 0.33
Shisa4Q8CA71 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa4Q8CA71 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Gm25948-201ENSMUST00000175334 112 ntBASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.1■□□□□ 0.33
Shisa4Q8CA71 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Shisa4Q8CA71 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Shisa4Q8CA71 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa4Q8CA71 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa4Q8CA71 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa4Q8CA71 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa4Q8CA71 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa4Q8CA71 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa4Q8CA71 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa4Q8CA71 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Shisa4Q8CA71 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa4Q8CA71 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa4Q8CA71 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Shisa4Q8CA71 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.08■□□□□ 0.32
Shisa4Q8CA71 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa4Q8CA71 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa4Q8CA71 Gm13823-201ENSMUST00000119930 345 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms