Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Gm17807-201ENSMUST00000186869 298 ntBASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc46a2Q8CA03 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Gm8097-201ENSMUST00000117903 829 ntBASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Gm15372-201ENSMUST00000120729 834 ntBASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a2Q8CA03 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc46a2Q8CA03 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc46a2Q8CA03 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc46a2Q8CA03 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc46a2Q8CA03 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.21□□□□□ -0.14
Slc46a2Q8CA03 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc46a2Q8CA03 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Gm17971-201ENSMUST00000190239 806 ntBASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.2□□□□□ -0.14
Slc46a2Q8CA03 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms