Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtp1Q8C8C1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rtp1Q8C8C1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtp1Q8C8C1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtp1Q8C8C1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Gm19220-201ENSMUST00000222682 803 ntBASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtp1Q8C8C1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtp1Q8C8C1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Rtp1Q8C8C1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rtp1Q8C8C1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtp1Q8C8C1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Rtp1Q8C8C1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtp1Q8C8C1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtp1Q8C8C1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms