Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Gm24158-201ENSMUST00000175263 71 ntBASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Gm9824-201ENSMUST00000178707 561 ntBASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Gm10253-201ENSMUST00000194270 940 ntBASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx1Q8C8B0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx1Q8C8B0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Alx1Q8C8B0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx1Q8C8B0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Gm10275-202ENSMUST00000168697 495 ntBASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Gm18766-201ENSMUST00000189811 808 ntBASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Gm10275-201ENSMUST00000092620 635 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms