Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Gm15920-201ENSMUST00000118998 402 ntBASIC16.16■□□□□ 0.18
Lin9Q8C735 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.16■□□□□ 0.18
Lin9Q8C735 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lin9Q8C735 Gm27494-201ENSMUST00000184735 189 ntBASIC16.16■□□□□ 0.18
Lin9Q8C735 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.16■□□□□ 0.18
Lin9Q8C735 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin9Q8C735 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin9Q8C735 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lin9Q8C735 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin9Q8C735 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin9Q8C735 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lin9Q8C735 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin9Q8C735 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lin9Q8C735 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin9Q8C735 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lin9Q8C735 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.15■□□□□ 0.18
Lin9Q8C735 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lin9Q8C735 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lin9Q8C735 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.15■□□□□ 0.18
Lin9Q8C735 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Gm27301-201ENSMUST00000184012 127 ntBASIC16.15■□□□□ 0.18
Lin9Q8C735 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Gm17968-201ENSMUST00000194902 784 ntBASIC16.15■□□□□ 0.18
Lin9Q8C735 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.15■□□□□ 0.18
Lin9Q8C735 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lin9Q8C735 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.15■□□□□ 0.18
Lin9Q8C735 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.15■□□□□ 0.18
Lin9Q8C735 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin9Q8C735 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lin9Q8C735 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.14■□□□□ 0.17
Lin9Q8C735 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lin9Q8C735 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lin9Q8C735 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.14■□□□□ 0.17
Lin9Q8C735 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.14■□□□□ 0.17
Lin9Q8C735 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.14■□□□□ 0.17
Lin9Q8C735 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.14■□□□□ 0.17
Lin9Q8C735 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.14■□□□□ 0.17
Lin9Q8C735 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin9Q8C735 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Lin9Q8C735 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Lin9Q8C735 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.13■□□□□ 0.17
Lin9Q8C735 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Lin9Q8C735 Gm8396-201ENSMUST00000057361 823 ntBASIC16.13■□□□□ 0.17
Lin9Q8C735 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.13■□□□□ 0.17
Lin9Q8C735 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lin9Q8C735 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.13■□□□□ 0.17
Lin9Q8C735 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin9Q8C735 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms