Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.22□□□□□ -0.29
Rft1Q8C3B8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rft1Q8C3B8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rft1Q8C3B8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rft1Q8C3B8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rft1Q8C3B8 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.21□□□□□ -0.3
Rft1Q8C3B8 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.21□□□□□ -0.3
Rft1Q8C3B8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rft1Q8C3B8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rft1Q8C3B8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rft1Q8C3B8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Gm13418-201ENSMUST00000119097 944 ntBASIC13.2□□□□□ -0.3
Rft1Q8C3B8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms