Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.28■□□□□ 0.36
Usp44Q8C2S0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp44Q8C2S0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp44Q8C2S0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Usp44Q8C2S0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp44Q8C2S0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp44Q8C2S0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp44Q8C2S0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp44Q8C2S0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp44Q8C2S0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp44Q8C2S0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp44Q8C2S0 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp44Q8C2S0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp44Q8C2S0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms