Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm28033-201ENSMUST00000184224 96 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44357-201ENSMUST00000195897 142 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm19658-201ENSMUST00000196231 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44367-201ENSMUST00000196836 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44350-201ENSMUST00000197197 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44390-201ENSMUST00000197533 144 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44313-201ENSMUST00000198018 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44486-201ENSMUST00000198508 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44314-201ENSMUST00000199263 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44394-201ENSMUST00000199558 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44484-201ENSMUST00000199873 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44466-201ENSMUST00000200264 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44359-201ENSMUST00000200671 138 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Birc2-201ENSMUST00000054878 378 ntBASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smim4Q8C1Q6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Gm21362-201ENSMUST00000194272 928 ntBASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Gm6376-201ENSMUST00000209407 580 ntBASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Rps4l-201ENSMUST00000071745 943 ntBASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.39□□□□□ -0.43
Smim4Q8C1Q6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms