Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps9d1Q8C190 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Gm10499-201ENSMUST00000174094 934 ntBASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.85□□□□□ -0.19
Vps9d1Q8C190 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps9d1Q8C190 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.84□□□□□ -0.19
Vps9d1Q8C190 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Gm18195-201ENSMUST00000207604 706 ntBASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Rps4l-201ENSMUST00000071745 943 ntBASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps9d1Q8C190 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms