Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trub1Q8C0D0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trub1Q8C0D0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Gm18206-201ENSMUST00000207027 926 ntBASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.22■□□□□ 0.03
Trub1Q8C0D0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms