Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ubr7Q8BU04 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ubr7Q8BU04 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ubr7Q8BU04 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ubr7Q8BU04 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ubr7Q8BU04 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ubr7Q8BU04 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ubr7Q8BU04 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Gm28630-201ENSMUST00000187806 498 ntBASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr7Q8BU04 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Gm27618-201ENSMUST00000183671 60 ntBASIC14.88□□□□□ -0.03
Ubr7Q8BU04 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Efs-202ENSMUST00000227037 2540 ntBASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ubr7Q8BU04 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.87□□□□□ -0.03
Ubr7Q8BU04 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms