Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Suds3Q8BR65 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Suds3Q8BR65 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Suds3Q8BR65 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Suds3Q8BR65 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Suds3Q8BR65 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Suds3Q8BR65 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.23■□□□□ 0.03
Suds3Q8BR65 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.23■□□□□ 0.03
Suds3Q8BR65 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.23■□□□□ 0.03
Suds3Q8BR65 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Suds3Q8BR65 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.22■□□□□ 0.03
Suds3Q8BR65 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.22■□□□□ 0.03
Suds3Q8BR65 Gm14140-201ENSMUST00000119999 995 ntBASIC15.22■□□□□ 0.03
Suds3Q8BR65 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.22■□□□□ 0.03
Suds3Q8BR65 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.22■□□□□ 0.03
Suds3Q8BR65 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.22■□□□□ 0.03
Suds3Q8BR65 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.22■□□□□ 0.03
Suds3Q8BR65 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Suds3Q8BR65 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.21■□□□□ 0.03
Suds3Q8BR65 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Gm37153-201ENSMUST00000193637 231 ntBASIC15.21■□□□□ 0.03
Suds3Q8BR65 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Suds3Q8BR65 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Suds3Q8BR65 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Suds3Q8BR65 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Suds3Q8BR65 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.21■□□□□ 0.02
Suds3Q8BR65 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Suds3Q8BR65 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Suds3Q8BR65 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Suds3Q8BR65 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms