Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Gm8000-201ENSMUST00000188378 592 ntBASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Gm4995-201ENSMUST00000117247 432 ntBASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Gm15467-201ENSMUST00000120582 445 ntBASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4Q8BQZ5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gm14494-201ENSMUST00000118786 435 ntBASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gm13597-201ENSMUST00000121239 375 ntBASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
Cpsf4Q8BQZ5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4Q8BQZ5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4Q8BQZ5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.33□□□□□ -0.11
Cpsf4Q8BQZ5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4Q8BQZ5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4Q8BQZ5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4Q8BQZ5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4Q8BQZ5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms