Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sfr1Q8BP27 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.07■□□□□ 0
Sfr1Q8BP27 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sfr1Q8BP27 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Sfr1Q8BP27 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.06■□□□□ 0
Sfr1Q8BP27 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.06■□□□□ 0
Sfr1Q8BP27 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.06■□□□□ 0
Sfr1Q8BP27 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.06■□□□□ 0
Sfr1Q8BP27 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sfr1Q8BP27 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.06■□□□□ 0
Sfr1Q8BP27 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.06■□□□□ 0
Sfr1Q8BP27 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sfr1Q8BP27 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.06■□□□□ 0
Sfr1Q8BP27 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.06■□□□□ 0
Sfr1Q8BP27 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.06■□□□□ 0
Sfr1Q8BP27 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.06■□□□□ 0
Sfr1Q8BP27 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sfr1Q8BP27 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.06■□□□□ 0
Sfr1Q8BP27 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sfr1Q8BP27 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Sfr1Q8BP27 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sfr1Q8BP27 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Sfr1Q8BP27 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Sfr1Q8BP27 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sfr1Q8BP27 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.05■□□□□ 0
Sfr1Q8BP27 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Sfr1Q8BP27 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Sfr1Q8BP27 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Sfr1Q8BP27 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sfr1Q8BP27 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sfr1Q8BP27 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Sfr1Q8BP27 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sfr1Q8BP27 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.05■□□□□ -0
Sfr1Q8BP27 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sfr1Q8BP27 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.05■□□□□ -0
Sfr1Q8BP27 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.05■□□□□ -0
Sfr1Q8BP27 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sfr1Q8BP27 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sfr1Q8BP27 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sfr1Q8BP27 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Sfr1Q8BP27 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sfr1Q8BP27 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.05■□□□□ -0
Sfr1Q8BP27 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sfr1Q8BP27 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sfr1Q8BP27 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.05■□□□□ -0
Sfr1Q8BP27 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.04■□□□□ -0
Sfr1Q8BP27 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.04■□□□□ -0
Sfr1Q8BP27 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.04■□□□□ -0
Sfr1Q8BP27 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Gm15427-201ENSMUST00000117288 531 ntBASIC15.04■□□□□ -0
Sfr1Q8BP27 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.04■□□□□ -0
Sfr1Q8BP27 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.04■□□□□ -0
Sfr1Q8BP27 Gm37935-201ENSMUST00000192012 982 ntBASIC15.04■□□□□ -0
Sfr1Q8BP27 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.04■□□□□ -0
Sfr1Q8BP27 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.04■□□□□ -0
Sfr1Q8BP27 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.04■□□□□ -0
Sfr1Q8BP27 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sfr1Q8BP27 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sfr1Q8BP27 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.03■□□□□ -0
Sfr1Q8BP27 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms