Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nod1Q8BHB0 Gm24543-201ENSMUST00000103867 82 ntBASIC15.52■□□□□ 0.08
Nod1Q8BHB0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nod1Q8BHB0 Gm44855-201ENSMUST00000205725 362 ntBASIC15.52■□□□□ 0.08
Nod1Q8BHB0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.52■□□□□ 0.08
Nod1Q8BHB0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.52■□□□□ 0.08
Nod1Q8BHB0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nod1Q8BHB0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nod1Q8BHB0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nod1Q8BHB0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nod1Q8BHB0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nod1Q8BHB0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nod1Q8BHB0 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.52■□□□□ 0.07
Nod1Q8BHB0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nod1Q8BHB0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Gm9719-201ENSMUST00000162765 543 ntBASIC15.51■□□□□ 0.07
Nod1Q8BHB0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Gm27680-201ENSMUST00000184192 160 ntBASIC15.51■□□□□ 0.07
Nod1Q8BHB0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.51■□□□□ 0.07
Nod1Q8BHB0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nod1Q8BHB0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Gm14719-201ENSMUST00000121891 340 ntBASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Gm5479-201ENSMUST00000160578 435 ntBASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Gm27838-201ENSMUST00000184829 128 ntBASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Nod1Q8BHB0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Syt7-204ENSMUST00000223586 1344 ntBASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Gm7488-201ENSMUST00000117148 684 ntBASIC15.49■□□□□ 0.07
Nod1Q8BHB0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.49■□□□□ 0.07
Nod1Q8BHB0 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nod1Q8BHB0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nod1Q8BHB0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nod1Q8BHB0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nod1Q8BHB0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms