Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Gm21854-201ENSMUST00000179901 471 ntBASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpidrQ8BGX7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 BC001981-202ENSMUST00000191393 1545 ntBASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Gm8515-201ENSMUST00000194852 576 ntBASIC17.12■□□□□ 0.33
SpidrQ8BGX7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpidrQ8BGX7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 AA619741-201ENSMUST00000195095 646 ntBASIC17.11■□□□□ 0.33
SpidrQ8BGX7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.11■□□□□ 0.33
SpidrQ8BGX7 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.11■□□□□ 0.33
SpidrQ8BGX7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SpidrQ8BGX7 Gm12138-201ENSMUST00000122180 951 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms