Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.82■□□□□ 0.12
Nucks1Q80XU3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nucks1Q80XU3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nucks1Q80XU3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Gm12008-201ENSMUST00000117791 755 ntBASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Gm13884-201ENSMUST00000118103 829 ntBASIC15.8■□□□□ 0.12
Nucks1Q80XU3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Gm28659-201ENSMUST00000188013 759 ntBASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Gm5864-201ENSMUST00000202263 970 ntBASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nucks1Q80XU3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Gm23547-201ENSMUST00000158210 271 ntBASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nucks1Q80XU3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms