Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp6nlQ80XC3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Gm12859-201ENSMUST00000117834 427 ntBASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Gm15653-201ENSMUST00000119247 907 ntBASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Gm13464-201ENSMUST00000119418 935 ntBASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Gm12490-201ENSMUST00000120255 560 ntBASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Gm45098-201ENSMUST00000207179 657 ntBASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Asic1-205ENSMUST00000228185 1818 ntBASIC16.29■□□□□ 0.2
Usp6nlQ80XC3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Gm4875-201ENSMUST00000118257 786 ntBASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Dupd1-202ENSMUST00000224735 548 ntBASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp6nlQ80XC3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Gm14928-201ENSMUST00000120198 477 ntBASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Gm46209-201ENSMUST00000217912 553 ntBASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp6nlQ80XC3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp6nlQ80XC3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms