Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.07■□□□□ 0.32
Prpf40bQ80W14 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.07■□□□□ 0.32
Prpf40bQ80W14 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Gm10154-201ENSMUST00000084445 354 ntBASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Gm12490-201ENSMUST00000120255 560 ntBASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf40bQ80W14 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.05■□□□□ 0.32
Prpf40bQ80W14 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Gm8410-201ENSMUST00000117225 605 ntBASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Gm16215-201ENSMUST00000161990 637 ntBASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Gm44855-201ENSMUST00000205725 362 ntBASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Prpf40bQ80W14 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Gm6973-201ENSMUST00000117080 721 ntBASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Gm2272-201ENSMUST00000194903 582 ntBASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf40bQ80W14 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms