Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC22.67■■□□□ 1.22
Rpap1Q80TE0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpap1Q80TE0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Gm27892-201ENSMUST00000185017 106 ntBASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rpap1Q80TE0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Gm14452-201ENSMUST00000118680 1632 ntBASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Gm12390-201ENSMUST00000117897 397 ntBASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpap1Q80TE0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.22
Rpap1Q80TE0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rpap1Q80TE0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rpap1Q80TE0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC22.64■■□□□ 1.22
Rpap1Q80TE0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
Rpap1Q80TE0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rpap1Q80TE0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Gm12882-201ENSMUST00000121696 517 ntBASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Mir1982-201ENSMUST00000157368 74 ntBASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Gm5356-201ENSMUST00000093326 615 ntBASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC22.64■■□□□ 1.21
Rpap1Q80TE0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Gm5279-201ENSMUST00000199575 745 ntBASIC22.63■■□□□ 1.21
Rpap1Q80TE0 Gm7067-201ENSMUST00000207698 1249 ntBASIC22.63■■□□□ 1.21
Rpap1Q80TE0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms