Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gm27989-201ENSMUST00000184721 107 ntBASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Gm27618-201ENSMUST00000183671 60 ntBASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.48■□□□□ 0.07
Prpf38bQ80SY5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Gm13453-201ENSMUST00000118708 357 ntBASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Prpf38bQ80SY5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms