Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Gm6973-201ENSMUST00000117080 721 ntBASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rnf139Q7TMV1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Gm14822-201ENSMUST00000122247 291 ntBASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Gm2213-201ENSMUST00000197485 688 ntBASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf139Q7TMV1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Gm11745-201ENSMUST00000121669 448 ntBASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Gm24513-201ENSMUST00000174964 138 ntBASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf139Q7TMV1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf139Q7TMV1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf139Q7TMV1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf139Q7TMV1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rnf139Q7TMV1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf139Q7TMV1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms