Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.41□□□□□ -0.1
Scn4bQ7M729 Gm5364-201ENSMUST00000216789 889 ntBASIC14.41□□□□□ -0.1
Scn4bQ7M729 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.4□□□□□ -0.1
Scn4bQ7M729 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn4bQ7M729 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.39□□□□□ -0.11
Scn4bQ7M729 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn4bQ7M729 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.38□□□□□ -0.11
Scn4bQ7M729 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms