Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Olfr286-202ENSMUST00000205305 969 ntBASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 AW822252-206ENSMUST00000208904 237 ntBASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm8Q6ZWM4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Gm6443-201ENSMUST00000203599 874 ntBASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.48■□□□□ 0.07
Lsm8Q6ZWM4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm8Q6ZWM4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Gm14494-201ENSMUST00000118786 435 ntBASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Gm17271-201ENSMUST00000165535 355 ntBASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm8Q6ZWM4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lsm8Q6ZWM4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lsm8Q6ZWM4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lsm8Q6ZWM4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms