Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm29310-201ENSMUST00000185468 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21825-201ENSMUST00000185728 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm29109-201ENSMUST00000185895 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21896-201ENSMUST00000186520 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21873-201ENSMUST00000186728 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21794-201ENSMUST00000187056 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21880-201ENSMUST00000187275 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21826-201ENSMUST00000187451 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21198-201ENSMUST00000188393 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21749-201ENSMUST00000189343 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21901-201ENSMUST00000189568 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm29424-201ENSMUST00000189716 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm28599-201ENSMUST00000189838 694 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21867-201ENSMUST00000189917 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm29269-201ENSMUST00000190087 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21722-201ENSMUST00000190153 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm28423-201ENSMUST00000190701 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21899-201ENSMUST00000190745 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21910-201ENSMUST00000191163 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21849-201ENSMUST00000191571 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm28678-201ENSMUST00000191593 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm20910-201ENSMUST00000193268 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm21871-201ENSMUST00000194621 696 ntBASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx58Q6Q899 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Gm12151-201ENSMUST00000121374 290 ntBASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Gm14767-201ENSMUST00000121559 586 ntBASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms