Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf220Q6PDX6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf220Q6PDX6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rnf220Q6PDX6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Gm10013-201ENSMUST00000106074 672 ntBASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Gm10252-201ENSMUST00000209541 832 ntBASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms