Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.58■□□□□ 0.24
Abcf1Q6P542 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Abcf1Q6P542 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Gm8344-201ENSMUST00000119813 856 ntBASIC16.57■□□□□ 0.24
Abcf1Q6P542 Mir5131-201ENSMUST00000175426 93 ntBASIC16.57■□□□□ 0.24
Abcf1Q6P542 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Abcf1Q6P542 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.56■□□□□ 0.24
Abcf1Q6P542 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.56■□□□□ 0.24
Abcf1Q6P542 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.56■□□□□ 0.24
Abcf1Q6P542 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abcf1Q6P542 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.55■□□□□ 0.24
Abcf1Q6P542 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.55■□□□□ 0.24
Abcf1Q6P542 Gm19087-201ENSMUST00000191430 946 ntBASIC16.55■□□□□ 0.24
Abcf1Q6P542 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.55■□□□□ 0.24
Abcf1Q6P542 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.55■□□□□ 0.24
Abcf1Q6P542 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms