Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.27■□□□□ 0.04
Rtl3Q6P1Y1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtl3Q6P1Y1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtl3Q6P1Y1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Gm13616-201ENSMUST00000120600 222 ntBASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rtl3Q6P1Y1 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms