Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhga7Q6DD96 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga7Q6DD96 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga7Q6DD96 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga7Q6DD96 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Pcdhga7Q6DD96 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Gm7222-201ENSMUST00000117512 906 ntBASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Gm6376-201ENSMUST00000209407 580 ntBASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.39□□□□□ -0.11
Pcdhga7Q6DD96 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Gm24589-201ENSMUST00000116692 94 ntBASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga7Q6DD96 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms