Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ltn1Q6A009 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.27■□□□□ 0.36
Ltn1Q6A009 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ltn1Q6A009 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.27■□□□□ 0.36
Ltn1Q6A009 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ltn1Q6A009 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ltn1Q6A009 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Ltn1Q6A009 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ltn1Q6A009 Mir1938-201ENSMUST00000158746 100 ntBASIC17.27■□□□□ 0.35
Ltn1Q6A009 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ltn1Q6A009 Mir7654-201ENSMUST00000185082 70 ntBASIC17.27■□□□□ 0.35
Ltn1Q6A009 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ltn1Q6A009 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Gm15824-201ENSMUST00000119516 955 ntBASIC17.26■□□□□ 0.35
Ltn1Q6A009 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ltn1Q6A009 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm11425-201ENSMUST00000119608 498 ntBASIC17.25■□□□□ 0.35
Ltn1Q6A009 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm2495-201ENSMUST00000191160 466 ntBASIC17.25■□□□□ 0.35
Ltn1Q6A009 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm8463-201ENSMUST00000208573 613 ntBASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm9396-201ENSMUST00000076703 567 ntBASIC17.25■□□□□ 0.35
Ltn1Q6A009 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm15806-201ENSMUST00000120696 955 ntBASIC17.25■□□□□ 0.35
Ltn1Q6A009 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ltn1Q6A009 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.25■□□□□ 0.35
Ltn1Q6A009 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.25■□□□□ 0.35
Ltn1Q6A009 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Gm12390-201ENSMUST00000117897 397 ntBASIC17.24■□□□□ 0.35
Ltn1Q6A009 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ltn1Q6A009 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ltn1Q6A009 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ltn1Q6A009 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ltn1Q6A009 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ltn1Q6A009 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.23■□□□□ 0.35
Ltn1Q6A009 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ltn1Q6A009 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ltn1Q6A009 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms