Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Knl1Q66JQ7 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.47■□□□□ 0.87
Knl1Q66JQ7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Knl1Q66JQ7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Knl1Q66JQ7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Knl1Q66JQ7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Knl1Q66JQ7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Gm5187-201ENSMUST00000117317 991 ntBASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Knl1Q66JQ7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC20.45■□□□□ 0.87
Knl1Q66JQ7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Knl1Q66JQ7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC20.45■□□□□ 0.87
Knl1Q66JQ7 Gm30437-201ENSMUST00000206086 1201 ntBASIC20.45■□□□□ 0.87
Knl1Q66JQ7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
Knl1Q66JQ7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Gm7553-201ENSMUST00000185805 1426 ntBASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Gm13612-201ENSMUST00000119276 390 ntBASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Gm24644-201ENSMUST00000157114 139 ntBASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Gm38241-201ENSMUST00000192641 898 ntBASIC20.45■□□□□ 0.86
Knl1Q66JQ7 AC192088.1-201ENSMUST00000227561 301 ntBASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Knl1Q66JQ7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Gm5370-201ENSMUST00000187187 574 ntBASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Gm43118-201ENSMUST00000199149 775 ntBASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Gm7619-201ENSMUST00000210649 1282 ntBASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Knl1Q66JQ7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Dctn4-202ENSMUST00000223590 1530 ntBASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Gm15957-201ENSMUST00000118893 974 ntBASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Knl1Q66JQ7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Knl1Q66JQ7 Gm11803-201ENSMUST00000119966 444 ntBASIC20.42■□□□□ 0.86
Knl1Q66JQ7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC20.42■□□□□ 0.86
Knl1Q66JQ7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms