Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Sdc3Q64519 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.23□□□□□ -0.13
Sdc3Q64519 Gm25925-201ENSMUST00000158314 306 ntBASIC14.23□□□□□ -0.13
Sdc3Q64519 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.23□□□□□ -0.13
Sdc3Q64519 Gm27494-201ENSMUST00000184735 189 ntBASIC14.23□□□□□ -0.13
Sdc3Q64519 Gm20553-201ENSMUST00000204205 844 ntBASIC14.23□□□□□ -0.13
Sdc3Q64519 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.23□□□□□ -0.13
Sdc3Q64519 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sdc3Q64519 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.23□□□□□ -0.13
Sdc3Q64519 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Sdc3Q64519 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.23□□□□□ -0.13
Sdc3Q64519 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.23□□□□□ -0.13
Sdc3Q64519 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc3Q64519 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.22□□□□□ -0.13
Sdc3Q64519 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.22□□□□□ -0.13
Sdc3Q64519 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.22□□□□□ -0.13
Sdc3Q64519 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Gm14701-201ENSMUST00000117156 348 ntBASIC14.22□□□□□ -0.13
Sdc3Q64519 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.22□□□□□ -0.13
Sdc3Q64519 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.22□□□□□ -0.13
Sdc3Q64519 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Sdc3Q64519 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc3Q64519 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sdc3Q64519 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Gm13365-201ENSMUST00000121188 973 ntBASIC14.21□□□□□ -0.13
Sdc3Q64519 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.21□□□□□ -0.13
Sdc3Q64519 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.21□□□□□ -0.13
Sdc3Q64519 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sdc3Q64519 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc3Q64519 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.21□□□□□ -0.13
Sdc3Q64519 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc3Q64519 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc3Q64519 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.21□□□□□ -0.14
Sdc3Q64519 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc3Q64519 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc3Q64519 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sdc3Q64519 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc3Q64519 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.2□□□□□ -0.14
Sdc3Q64519 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.2□□□□□ -0.14
Sdc3Q64519 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms