Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.05■□□□□ 0.32
Foxd1Q61345 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Foxd1Q61345 Gm9385-201ENSMUST00000117563 472 ntBASIC17.05■□□□□ 0.32
Foxd1Q61345 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Mir5132-201ENSMUST00000175166 71 ntBASIC17.05■□□□□ 0.32
Foxd1Q61345 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Foxd1Q61345 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Foxd1Q61345 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Foxd1Q61345 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxd1Q61345 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.05■□□□□ 0.32
Foxd1Q61345 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxd1Q61345 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.04■□□□□ 0.32
Foxd1Q61345 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxd1Q61345 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxd1Q61345 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.04■□□□□ 0.32
Foxd1Q61345 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Gm28630-201ENSMUST00000187806 498 ntBASIC17.04■□□□□ 0.32
Foxd1Q61345 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxd1Q61345 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Foxd1Q61345 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxd1Q61345 BC037039-201ENSMUST00000192003 2205 ntBASIC17.04■□□□□ 0.32
Foxd1Q61345 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxd1Q61345 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Foxd1Q61345 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm14042-201ENSMUST00000120139 833 ntBASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm8062-201ENSMUST00000139696 444 ntBASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm5035-201ENSMUST00000215581 927 ntBASIC17.03■□□□□ 0.32
Foxd1Q61345 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Gm20445-201ENSMUST00000061905 565 ntBASIC17.03■□□□□ 0.32
Foxd1Q61345 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Foxd1Q61345 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxd1Q61345 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Foxd1Q61345 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Foxd1Q61345 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.02■□□□□ 0.32
Foxd1Q61345 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Foxd1Q61345 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Gm6973-201ENSMUST00000117080 721 ntBASIC17.02■□□□□ 0.32
Foxd1Q61345 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.02■□□□□ 0.32
Foxd1Q61345 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.02■□□□□ 0.32
Foxd1Q61345 Gm7593-201ENSMUST00000187246 644 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms