Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col11a1Q61245 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Gm12928-201ENSMUST00000117115 573 ntBASIC16.26■□□□□ 0.19
Col11a1Q61245 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Col11a1Q61245 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col11a1Q61245 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.26■□□□□ 0.19
Col11a1Q61245 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Gm10012-201ENSMUST00000078252 192 ntBASIC16.26■□□□□ 0.19
Col11a1Q61245 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col11a1Q61245 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a1Q61245 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Col11a1Q61245 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.25■□□□□ 0.19
Col11a1Q61245 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.25■□□□□ 0.19
Col11a1Q61245 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.25■□□□□ 0.19
Col11a1Q61245 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.25■□□□□ 0.19
Col11a1Q61245 Gm18905-201ENSMUST00000205454 928 ntBASIC16.25■□□□□ 0.19
Col11a1Q61245 Gm7561-201ENSMUST00000211203 886 ntBASIC16.25■□□□□ 0.19
Col11a1Q61245 Gm9823-201ENSMUST00000051212 327 ntBASIC16.25■□□□□ 0.19
Col11a1Q61245 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col11a1Q61245 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.25■□□□□ 0.19
Col11a1Q61245 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a1Q61245 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Gm29127-201ENSMUST00000188304 517 ntBASIC16.24■□□□□ 0.19
Col11a1Q61245 Gm43094-201ENSMUST00000196549 921 ntBASIC16.24■□□□□ 0.19
Col11a1Q61245 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Gm18027-201ENSMUST00000218947 619 ntBASIC16.24■□□□□ 0.19
Col11a1Q61245 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.24■□□□□ 0.19
Col11a1Q61245 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.24■□□□□ 0.19
Col11a1Q61245 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 Gm22018-201ENSMUST00000104357 131 ntBASIC16.24■□□□□ 0.19
Col11a1Q61245 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.24■□□□□ 0.19
Col11a1Q61245 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.24■□□□□ 0.19
Col11a1Q61245 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a1Q61245 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms