Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cln3Q61124 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln3Q61124 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln3Q61124 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cln3Q61124 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.13■□□□□ 0.17
Cln3Q61124 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cln3Q61124 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Cln3Q61124 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Cln3Q61124 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.13■□□□□ 0.17
Cln3Q61124 Gm18187-201ENSMUST00000196476 984 ntBASIC16.13■□□□□ 0.17
Cln3Q61124 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.13■□□□□ 0.17
Cln3Q61124 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cln3Q61124 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.13■□□□□ 0.17
Cln3Q61124 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cln3Q61124 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cln3Q61124 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln3Q61124 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cln3Q61124 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.12■□□□□ 0.17
Cln3Q61124 Gm12091-201ENSMUST00000146791 830 ntBASIC16.12■□□□□ 0.17
Cln3Q61124 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cln3Q61124 Gm18018-201ENSMUST00000198273 408 ntBASIC16.12■□□□□ 0.17
Cln3Q61124 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.12■□□□□ 0.17
Cln3Q61124 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Gm45668-201ENSMUST00000211271 493 ntBASIC16.12■□□□□ 0.17
Cln3Q61124 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.12■□□□□ 0.17
Cln3Q61124 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cln3Q61124 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cln3Q61124 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cln3Q61124 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cln3Q61124 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.11■□□□□ 0.17
Cln3Q61124 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Cln3Q61124 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.11■□□□□ 0.17
Cln3Q61124 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Gm11434-201ENSMUST00000122379 629 ntBASIC16.11■□□□□ 0.17
Cln3Q61124 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.11■□□□□ 0.17
Cln3Q61124 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.11■□□□□ 0.17
Cln3Q61124 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cln3Q61124 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Cln3Q61124 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.11■□□□□ 0.17
Cln3Q61124 Gm28631-201ENSMUST00000190740 334 ntBASIC16.11■□□□□ 0.17
Cln3Q61124 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cln3Q61124 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.11■□□□□ 0.17
Cln3Q61124 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.11■□□□□ 0.17
Cln3Q61124 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Gm9797-201ENSMUST00000052902 613 ntBASIC16.11■□□□□ 0.17
Cln3Q61124 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.11■□□□□ 0.17
Cln3Q61124 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cln3Q61124 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cln3Q61124 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms