Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfaip3Q60769 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Tnfaip3Q60769 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfaip3Q60769 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm6973-201ENSMUST00000117080 721 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm11543-201ENSMUST00000120758 370 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Mir6990-201ENSMUST00000183724 91 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm44335-201ENSMUST00000196879 141 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm44297-201ENSMUST00000198304 141 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm44346-201ENSMUST00000198851 141 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfaip3Q60769 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Gm18737-201ENSMUST00000173594 937 ntBASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfaip3Q60769 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tnfaip3Q60769 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Gm14701-201ENSMUST00000117156 348 ntBASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfaip3Q60769 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms