Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm1Q60636 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm1Q60636 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm1Q60636 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Prdm1Q60636 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm1Q60636 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm1Q60636 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm1Q60636 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Prdm1Q60636 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm1Q60636 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.28■□□□□ 0.36
Prdm1Q60636 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm1Q60636 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.27■□□□□ 0.36
Prdm1Q60636 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Prdm1Q60636 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.27■□□□□ 0.36
Prdm1Q60636 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.27■□□□□ 0.36
Prdm1Q60636 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.27■□□□□ 0.36
Prdm1Q60636 Gm6736-201ENSMUST00000166583 948 ntBASIC17.27■□□□□ 0.36
Prdm1Q60636 Gm27494-201ENSMUST00000184735 189 ntBASIC17.27■□□□□ 0.36
Prdm1Q60636 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.27■□□□□ 0.36
Prdm1Q60636 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm1Q60636 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.27■□□□□ 0.35
Prdm1Q60636 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.27■□□□□ 0.35
Prdm1Q60636 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm1Q60636 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm1Q60636 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm1Q60636 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.35
Prdm1Q60636 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm1Q60636 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm1Q60636 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Prdm1Q60636 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Prdm1Q60636 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.26■□□□□ 0.35
Prdm1Q60636 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Prdm1Q60636 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.26■□□□□ 0.35
Prdm1Q60636 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.26■□□□□ 0.35
Prdm1Q60636 Chchd1-203ENSMUST00000224633 557 ntBASIC17.26■□□□□ 0.35
Prdm1Q60636 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prdm1Q60636 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prdm1Q60636 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm1Q60636 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Gm13464-201ENSMUST00000119418 935 ntBASIC17.25■□□□□ 0.35
Prdm1Q60636 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Gm2756-201ENSMUST00000195851 400 ntBASIC17.25■□□□□ 0.35
Prdm1Q60636 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.25■□□□□ 0.35
Prdm1Q60636 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
Prdm1Q60636 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Gm5867-201ENSMUST00000063197 592 ntBASIC17.25■□□□□ 0.35
Prdm1Q60636 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm1Q60636 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Prdm1Q60636 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms