Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Mir1895-201ENSMUST00000122615 79 ntBASIC14.14□□□□□ -0.15
Xrcc1Q60596 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.14□□□□□ -0.15
Xrcc1Q60596 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.14□□□□□ -0.15
Xrcc1Q60596 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.14□□□□□ -0.15
Xrcc1Q60596 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Xrcc1Q60596 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Chchd1-203ENSMUST00000224633 557 ntBASIC14.13□□□□□ -0.15
Xrcc1Q60596 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.13□□□□□ -0.15
Xrcc1Q60596 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xrcc1Q60596 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.12□□□□□ -0.15
Xrcc1Q60596 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.12□□□□□ -0.15
Xrcc1Q60596 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Gm13365-201ENSMUST00000121188 973 ntBASIC14.12□□□□□ -0.15
Xrcc1Q60596 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms