Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm27838-201ENSMUST00000184829 128 ntBASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gm2423-201ENSMUST00000074863 733 ntBASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Gm14719-201ENSMUST00000121891 340 ntBASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Gm11424-201ENSMUST00000121929 829 ntBASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Gm9182-201ENSMUST00000217829 639 ntBASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Gm7775-201ENSMUST00000218871 853 ntBASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6-2Q5R1I4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Gm15487-201ENSMUST00000122373 465 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Gm16215-201ENSMUST00000161990 637 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Shd-206ENSMUST00000225145 998 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Syt7-205ENSMUST00000224135 1557 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms