Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm15358-201ENSMUST00000119249 520 ntBASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm43767-201ENSMUST00000198933 381 ntBASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm6345-202ENSMUST00000180900 204 ntBASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Grk6-207ENSMUST00000225925 2769 ntBASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms