Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Trav3-3Q5R1C3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Gm44450-201ENSMUST00000199528 114 ntBASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-3Q5R1C3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms