Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Mir6420-201ENSMUST00000185032 102 ntBASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Gm28911-201ENSMUST00000188837 117 ntBASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Gm37230-201ENSMUST00000194491 818 ntBASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-2Q5R1B6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Gm12742-201ENSMUST00000117326 410 ntBASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Gm27892-201ENSMUST00000185017 106 ntBASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Olfr286-202ENSMUST00000205305 969 ntBASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Gm45841-201ENSMUST00000207700 164 ntBASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-2Q5R1B6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Gm15460-201ENSMUST00000118147 391 ntBASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Gm12341-201ENSMUST00000119724 503 ntBASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms