Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Gm9200-201ENSMUST00000118513 1354 ntBASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Gm13392-201ENSMUST00000117708 150 ntBASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Gm4691-201ENSMUST00000182339 1000 ntBASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Gm2451-201ENSMUST00000199447 999 ntBASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Gm10290-201ENSMUST00000200451 999 ntBASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Shd-206ENSMUST00000225145 998 ntBASIC25.52■■□□□ 1.68
Trim41Q5NCC3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Gm42901-201ENSMUST00000197735 3171 ntBASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim41Q5NCC3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC25.51■■□□□ 1.68
Trim41Q5NCC3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Gm30437-201ENSMUST00000206086 1201 ntBASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim41Q5NCC3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Gm14042-201ENSMUST00000120139 833 ntBASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Gm11918-201ENSMUST00000121660 179 ntBASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
Trim41Q5NCC3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Rn7s1-201ENSMUST00000174924 300 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Rn7s2-201ENSMUST00000175032 300 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm26461-201ENSMUST00000175064 290 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm29310-201ENSMUST00000185468 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21825-201ENSMUST00000185728 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm29109-201ENSMUST00000185895 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21896-201ENSMUST00000186520 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21873-201ENSMUST00000186728 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21794-201ENSMUST00000187056 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21880-201ENSMUST00000187275 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21826-201ENSMUST00000187451 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21198-201ENSMUST00000188393 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21749-201ENSMUST00000189343 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21901-201ENSMUST00000189568 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm29424-201ENSMUST00000189716 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm28599-201ENSMUST00000189838 694 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21867-201ENSMUST00000189917 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm29269-201ENSMUST00000190087 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21722-201ENSMUST00000190153 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm28423-201ENSMUST00000190701 696 ntBASIC25.49■■□□□ 1.67
Trim41Q5NCC3 Gm21899-201ENSMUST00000190745 696 ntBASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms