Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Gm4986-201ENSMUST00000119731 549 ntBASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Gm28265-201ENSMUST00000188201 2319 ntBASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Gm12217-201ENSMUST00000118858 696 ntBASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Gm44999-201ENSMUST00000207456 1493 ntBASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Gm7556-201ENSMUST00000201178 1084 ntBASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc2Q4U2R1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 Gm14208-201ENSMUST00000119645 678 ntBASIC8.59□□□□□ -1.04
Herc2Q4U2R1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Herc2Q4U2R1 n-R5s195-201ENSMUST00000082891 119 ntBASIC8.59□□□□□ -1.04
Herc2Q4U2R1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Gm11964-201ENSMUST00000120982 444 ntBASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Mir6927-201ENSMUST00000184494 71 ntBASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Gm20392-201ENSMUST00000173047 701 ntBASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Morn2-202ENSMUST00000227729 656 ntBASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC8.58□□□□□ -1.04
Herc2Q4U2R1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Herc2Q4U2R1 Gm11439-201ENSMUST00000118598 409 ntBASIC8.57□□□□□ -1.04
Herc2Q4U2R1 Gm26464-201ENSMUST00000157094 305 ntBASIC8.57□□□□□ -1.04
Herc2Q4U2R1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC8.57□□□□□ -1.04
Herc2Q4U2R1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc2Q4U2R1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc2Q4U2R1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc2Q4U2R1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms