Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Gm9727-201ENSMUST00000161387 555 ntBASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne3Q4FZC9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Syne3Q4FZC9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Syne3Q4FZC9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Syne3Q4FZC9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Syne3Q4FZC9 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.69■□□□□ 0.1
Syne3Q4FZC9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.69■□□□□ 0.1
Syne3Q4FZC9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne3Q4FZC9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms