Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ckap2Q3V1H1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Mir1895-201ENSMUST00000122615 79 ntBASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Gm18737-201ENSMUST00000173594 937 ntBASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Gm9182-201ENSMUST00000217829 639 ntBASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.93■□□□□ 0.3
Ckap2Q3V1H1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Gm2810-201ENSMUST00000118681 990 ntBASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Gm11543-201ENSMUST00000120758 370 ntBASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Rprl2-201ENSMUST00000157150 290 ntBASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Ckap2Q3V1H1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Gm12134-201ENSMUST00000122109 520 ntBASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms