Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Gm13464-201ENSMUST00000119418 935 ntBASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Gm27301-201ENSMUST00000184012 127 ntBASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cdkl5Q3UTQ8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gm8749-201ENSMUST00000117737 331 ntBASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Mir8117-201ENSMUST00000184773 107 ntBASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl5Q3UTQ8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Carlr-201ENSMUST00000181515 2574 ntBASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Gm44771-201ENSMUST00000206975 626 ntBASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl5Q3UTQ8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms