Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Mir7654-201ENSMUST00000185082 70 ntBASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam196aQ3USH1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Fam196aQ3USH1 Gm12585-201ENSMUST00000117307 290 ntBASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.77□□□□□ -0.05
Fam196aQ3USH1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Mir125a-201ENSMUST00000083545 68 ntBASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fam196aQ3USH1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam196aQ3USH1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.75□□□□□ -0.05
Fam196aQ3USH1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms